Characterizing Primary Mesothelioma Cell Lines by Exome Sequencing
Description
Malignant Pleural Mesothelioma is a type of lung cancer usually discovered at an advanced stage at which point there is no cure. Six primary MPM cell lines were used to conduct in vitro research to make conclusions about specific gene mutations associated with Mesothelioma. DNA exome sequencing, a time efficient and inexpensive technique, was used for identifying specific DNA mutations. Computational analysis of exome sequencing data was used to make conclusions about copy number variation among common MPM genes. Results show a CDKN2A gene heterozygous deletion in Meso24 cell line. This data is validated by a previous CRISPR-Cas9 outgrowth screen for Meso24 where the knocked-out gene caused increased Meso24 growth.
Date Created
The date the item was original created (prior to any relationship with the ASU Digital Repositories.)
2020-05
Agent
- Author (aut): Krdi, Ghena
- Thesis director: Plaisier, Christopher
- Committee member: Wilson, Melissa
- Contributor (ctb): School of Life Sciences
- Contributor (ctb): Hugh Downs School of Human Communication
- Contributor (ctb): Barrett, The Honors College