An Integrated Biological Process for the Valorization of Lignin to Polyvinyl Phenol

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Description
Phenolic polymers such as polyphenols and polyphenylenes are generated industrially for several applications but are typically associated with harsh reaction conditions and environmentally hazardous chemicals, such as formaldehyde. Additionally, hydroxycinnamic acids, such as p-coumaric acid (CA), are found in high

Phenolic polymers such as polyphenols and polyphenylenes are generated industrially for several applications but are typically associated with harsh reaction conditions and environmentally hazardous chemicals, such as formaldehyde. Additionally, hydroxycinnamic acids, such as p-coumaric acid (CA), are found in high concentrations in underutilized lignin-derived hydrolysates and represent a renewable and sustainable feedstock for the production of various aromatics and phenolics. To that end, recently a strain of Corynebacterium glutamicum has been developed by the Joint Bioenergy Institute to express a Phenolic Acid Decarboxylase (PAD), which can convert CA into 4-vinylphenol (4VP). 4VP is cytotoxic but can be polymerized by ligninolytic enzymes such as laccases or peroxidases into less-toxic poly(4-vinylphenol) (PVP). This work investigates the potential of polymerizing 4VP in situ by adding ligninolytic enzymes into the fermentation media to polymerize 4VP into PVP as it is produced, while reducing cellular toxicity to aid in chemical conversion. The engineered C. glutamicum strain was cultured in the presence of CA to produce 4VP, with a maximum yield of 80.75%. Simultaneously, two ligninolytic enzymes, laccase and horseradish peroxidase (HRP), were explored in an in vitro experiment for their ability to polymerize 4VP, with laccase achieving full polymerization within 45 minutes and HRP able to polymerize 54.06% of 4VP in 24 hours. The resulting polymers were further analyzed by using gas permeation chromatography - nuclear magnetic resonance, validating the synthesis of PVP from 4VP with the addition of laccase or HRP. Finally, the C. glutamicum strain was evaluated for its ability to grow in the presence of hydrogen peroxide, which is a necessary reagent for HRP functionality, and it was able to reach an optical density of 3.69 within 36 hours. These findings suggest that in situ polymerization may be possible. Further work is underway to explore the enzyme kinetics at different pH, validate the potential of polymerization in situ, and study the fermentative benefits associated with in situ polymerization. This will be followed by additional analytical studies to characterize the resulting PVP.
Date Created
2022-05
Agent

The Impact of Disability Characteristics on the Experiences of Undergraduate STEM Students

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Description
Students with disabilities are underrepresented and underserved in college science, technology, engineering and math (STEM) degrees. Disabled individuals comprise 26% of the U.S. population but only about 9% of the students enrolled in STEM undergraduate programs. Individuals with disabilities who

Students with disabilities are underrepresented and underserved in college science, technology, engineering and math (STEM) degrees. Disabled individuals comprise 26% of the U.S. population but only about 9% of the students enrolled in STEM undergraduate programs. Individuals with disabilities who do pursue STEM degrees report unique challenges within their programs, including struggling to receive needed accommodations and experiencing discrimination from peers and instructors. However, there has been limited research on the extent to which disability characteristics affect their experiences in STEM. To address this gap in the literature, we surveyed over 700 undergraduates with disabilities enrolled in STEM majors across the U.S. and probed their sense of belonging in science, feelings of morale, perception of campus climate, experienced classroom stigma, responsiveness of disability resource offices, scientific self-efficacy, science identity, and science community values. Using linear regression, we will assess and present on outcomes related to students’ persistence in college, outcomes specific to students with disabilities, and outcomes specific to these students in STEM. The findings of this work can be used to inform recommendations to create more inclusive experiences in college STEM for students with disabilities.
Date Created
2022-05
Agent

Enzymatic Reactive Extraction for the Production of Short-Chain Esters

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Description

Esters are important solvents in multiple industries including adhesives, food, and pharmaceuticals. Although esters are biodegradable solvents, the conventional process of producing them is not eco-friendly because they are largely derived from petrochemicals. This has led scientists to consider implementing

Esters are important solvents in multiple industries including adhesives, food, and pharmaceuticals. Although esters are biodegradable solvents, the conventional process of producing them is not eco-friendly because they are largely derived from petrochemicals. This has led scientists to consider implementing biological routes in their production process by incorporating heterologous or improving inherent esterification pathways. However, due to inequality in the biosynthesis of esters and their precursors (organic acid and alcohol), a significant amount of precursors are left unconverted, thereby lowering overall esterification efficiency. Therefore, the primary goal of the current research is to improve the ester titers by incorporating one more step of in vitro esterification with the culture broth, thereby esterifying the unconverted precursors using high efficiency commercial enzymes in the presence of compatible organic solvent. In principle, the medium containing the precursors will be treated with the enzyme in presence of organic solvent, where the precursors will be distributed in both the phases, aqueous and organic, based on their polarity, and the enzymatic esterification will happen at the interface. Hence, as a first step, efforts were made to optimize the reaction conditions, beginning with choosing the most efficient organic solvent and corresponding enzyme candidate. Our results showed that, for production of ethyl acetate through this reactive extraction approach, Novozyme435 exhibited significant esterification with chloroform, with almost 85% conversion efficiency. Further optimizations with phase ratios, pH and incubation time showed that the pH 6.0 (3.1 g/L) was the most optimum where ethyl acetate titer was found to improve 10 times than that at pH 7.0 (0.164 g/L) with the phase ratio of 1:1. The kinetic studies further added that the incubation at 37oC gives the maximum ethyl acetate production within 8h. After initial optimization studies, cell broth from E. coli cells transformed to overproduce an esterase was also tested with the reactive extraction method. It was found that there was a ~7.5X decrease in ethyl acetate production in the cell media versus synthetic samples with the same concentration of reactants. Such a large decrease indicates that enzymatic promiscuity or inhibition currently prevent the cell samples from reaching the same conversion as synthetic studies. To characterize the maximum reaction rate (Vmax) and affinity constants of the substrates to Novozym 435, further kinetic studies were performed with one minute of reaction. The mathematical model employed assumes that enzyme kinetics rather than diffusion was the rate limiting step, that the concentrations of reactants at the interface are equivalent to the initial concentration of reactants, and that neither substrate is an inhibitor. Vmax was found to be 18.5 Mmol min-1g-1 (of catalyst used), and the affinity constants were 0.957 M and 0.00557 M for acetic acid and ethanol respectively. Vmax was similar to literature values with Novozym 435, and the affinity constants indicate a much higher binding efficiency of ethanol in comparison to acetic acid, indicating that a cocktail of esters are likely produced from Novozym 435 in cell broth. Overall, moving away from fossil-fuel dependence is necessary to promote sustainable industry standards, and microbial cell factories combined with reactive extraction, if optimized for industrial applications, can replace harmful environmental procedures. By optimizing the reactive extraction process for ester production, biorefineries could become more competitive and economically feasible for numerous applications.

Date Created
2022-05
Agent

Millman Thesis Defense Presentation (Spring 2022)

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Description

This honors thesis covers an overview of the the motivation, objectives, and projects of the Xie Research Group, focusing on the mechanical effect of dopants (through p-doping) on the structural domains of conjugated polymers (specifically P3DT). The ability to sustainably

This honors thesis covers an overview of the the motivation, objectives, and projects of the Xie Research Group, focusing on the mechanical effect of dopants (through p-doping) on the structural domains of conjugated polymers (specifically P3DT). The ability to sustainably 3D-print conjugated polymers has the potential to impact a variety of industries (personalized technology, medical treatment, replacement of metals, etc).

Date Created
2022-05
Agent

Millman Final Project (Spring 2022)

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Description

This honors thesis covers an overview of the the motivation, objectives, and projects of the Xie Research Group, focusing on the mechanical effect of dopants (through p-doping) on the structural domains of conjugated polymers (specifically P3DT). The ability to sustainably

This honors thesis covers an overview of the the motivation, objectives, and projects of the Xie Research Group, focusing on the mechanical effect of dopants (through p-doping) on the structural domains of conjugated polymers (specifically P3DT). The ability to sustainably 3D-print conjugated polymers has the potential to impact a variety of industries (personalized technology, medical treatment, replacement of metals, etc).

Date Created
2022-05
Agent

Rheological Analysis of the Effects of Dopants on the Mechanical Properties of Conjugated Polymers

Description
This honors thesis covers an overview of the the motivation, objectives, and projects of the Xie Research Group, focusing on the mechanical effect of dopants (through p-doping) on the structural domains of conjugated polymers (specifically P3DT). The ability to sustainably

This honors thesis covers an overview of the the motivation, objectives, and projects of the Xie Research Group, focusing on the mechanical effect of dopants (through p-doping) on the structural domains of conjugated polymers (specifically P3DT). The ability to sustainably 3D-print conjugated polymers has the potential to impact a variety of industries (personalized technology, medical treatment, replacement of metals, etc).
Date Created
2022-05
Agent

A Comparison of Online and In-Person Mock Trial: The Effect of the COVID-19 Pandemic on Undergraduate Mock Trial

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Description
Undergraduate mock trial is an competition where undergraduate students conduct a fake trial. Due to the COVID-19 pandemic, mock trial became an online activity. This paper studied the differences between the in-person and online versions of the activity, including differences

Undergraduate mock trial is an competition where undergraduate students conduct a fake trial. Due to the COVID-19 pandemic, mock trial became an online activity. This paper studied the differences between the in-person and online versions of the activity, including differences in presentation, technology, and communication. Mock trial competitors and judges from around the country were surveyed about the differences. The results showed that there was a clear favor for in-person mock trial, and though online mock trial had some drawbacks, the accessibility of online mock trial indicates that it can serve as an introduction and good substitute when in-person mock trial is not available.
Date Created
2022-05
Agent

Evaluating the Value of Social and Environmental Justice in Engineering

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Description

This study was conducted in order to better understand the ways in which social and environmental justice curriculum would suit engineers. In particular, it focuses on how social and environmental justice are valued in engineering and the internal and external

This study was conducted in order to better understand the ways in which social and environmental justice curriculum would suit engineers. In particular, it focuses on how social and environmental justice are valued in engineering and the internal and external barriers engineers face in pursuing it. The research first discusses the role of engineering in social and environmental justice, followed by common engineering ideologies and existing interactions between engineers and justice. The results in this paper presents the findings of qualitative data analysis of transcriptions of interviews conducted with engineers regarding social and environmental justice. The responses of interviewees were organized into different categories of value and obstacles were identified, analyzed, and discussed. The interpretations presented in this paper are tentative and are a part of an ongoing study that will be released at a later date.

Date Created
2022-05
Agent

Genetics Book

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Description

This thesis summarizes the process of writing a children's book about achondroplasia directed at children without genetic disorders. The thesis also includes the children's book The Genetics of Little People that was created during the project.

Date Created
2022-05
Agent

Watkins Dissertation Final Draft (Spring 2022)

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Description

This thesis summarizes the process of writing a children's book about achondroplasia directed at children without genetic disorders. The thesis also includes the children's book The Genetics of Little People that was created during the project.

Date Created
2022-05
Agent